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Question: how to link ReactomePA with DESeq2
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gravatar for ta_awwad
14 months ago by
ta_awwad0
ta_awwad0 wrote:

Hi everyone,

Is there any script that links DE genes identified by DEseq2  directly to ReactomePA for Functional enrichment analysis?

thanks much

 

ADD COMMENTlink modified 14 months ago by Guangchuang Yu800 • written 14 months ago by ta_awwad0
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gravatar for Guangchuang Yu
14 months ago by
Hong Kong
Guangchuang Yu800 wrote:
see https://github.com/twbattaglia/RNAseq-workflow On Sun, Sep 25, 2016 at 7:37 AM, ta_awwad [bioc] <noreply@bioconductor.org> wrote: > Activity on a post you are following on support.bioconductor.org > > User ta_awwad <https: support.bioconductor.org="" u="" 11382=""/> wrote Question: > how to link ReactomePA with DESeq2 > <https: support.bioconductor.org="" p="" 87448=""/>: > > Hi everyone, > > Is there any script that links DE genes identified by DEseq2 directly > to ReactomePA for Functional enrichment analysis? > > thanks much > > > > ------------------------------ > > Post tags: ReactomePA, GO > > You may reply via email or visit how to link ReactomePA with DESeq2 > -- --~--~---------~--~----~------------~-------~--~----~ Guangchuang Yu, PhD Candidate State Key Laboratory of Emerging Infectious Diseases School of Public Health The University of Hong Kong Hong Kong SAR, China www: https://guangchuangyu.github.io -~----------~----~----~----~------~----~------~--~---
ADD COMMENTlink written 14 months ago by Guangchuang Yu800
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