how to link ReactomePA with DESeq2
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ta_awwad ▴ 10
@ta_awwad-11382
Last seen 2.6 years ago
Frankfurt am Main

Hi everyone,

Is there any script that links DE genes identified by DEseq2  directly to ReactomePA for Functional enrichment analysis?

thanks much

 

ReactomePA GO • 952 views
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Guangchuang Yu ★ 1.2k
@guangchuang-yu-5419
Last seen 8 months ago
China/Guangzhou/Southern Medical Univer…
see https://github.com/twbattaglia/RNAseq-workflow On Sun, Sep 25, 2016 at 7:37 AM, ta_awwad [bioc] <noreply@bioconductor.org> wrote: > Activity on a post you are following on support.bioconductor.org > > User ta_awwad <https: support.bioconductor.org="" u="" 11382=""/> wrote Question: > how to link ReactomePA with DESeq2 > <https: support.bioconductor.org="" p="" 87448=""/>: > > Hi everyone, > > Is there any script that links DE genes identified by DEseq2 directly > to ReactomePA for Functional enrichment analysis? > > thanks much > > > > ------------------------------ > > Post tags: ReactomePA, GO > > You may reply via email or visit how to link ReactomePA with DESeq2 > -- --~--~---------~--~----~------------~-------~--~----~ Guangchuang Yu, PhD Candidate State Key Laboratory of Emerging Infectious Diseases School of Public Health The University of Hong Kong Hong Kong SAR, China www: https://guangchuangyu.github.io -~----------~----~----~----~------~----~------~--~---
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