Question: Dependent library issue when loading ReactomePA
0
gravatar for elitemao
2.7 years ago by
elitemao0
elitemao0 wrote:

Hi,

When I load ReactomePA, I got the following error message:

---------------------------------------------------------------------------------------------------------------------

Error in unloadNamespace(package) : 
  namespace ‘DBI’ is imported by ‘RSQLite’, ‘AnnotationDbi’ so cannot be unloaded
In addition: There were 50 or more warnings (use warnings() to see the first 50)
Error in library(DBI) : Package ‘DBI’ version 0.4.1 cannot be unloaded
Calls: func_sigGeneExtractEnrichAnalysis1 -> library
Execution halted

---------------------------------------------------------------------------------------------------------------------

How can I resolve this package dependency issue? Thanks.

Erik

 

 

 

reactomepa • 593 views
ADD COMMENTlink modified 2.7 years ago by James W. MacDonald50k • written 2.7 years ago by elitemao0
Answer: Dependent library issue when loading ReactomePA
0
gravatar for James W. MacDonald
2.7 years ago by
United States
James W. MacDonald50k wrote:

That looks like you have a .Rdata file floating around in the directory that you are starting R in. Does starting R in a different directory or by starting R like this:

R --vanilla

to ignore the .Rdata file, and then loading ReactomePA work?

ADD COMMENTlink written 2.7 years ago by James W. MacDonald50k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 316 users visited in the last hour