Question: Dependent library issue when loading ReactomePA
gravatar for elitemao
17 months ago by
elitemao0 wrote:


When I load ReactomePA, I got the following error message:


Error in unloadNamespace(package) : 
  namespace ‘DBI’ is imported by ‘RSQLite’, ‘AnnotationDbi’ so cannot be unloaded
In addition: There were 50 or more warnings (use warnings() to see the first 50)
Error in library(DBI) : Package ‘DBI’ version 0.4.1 cannot be unloaded
Calls: func_sigGeneExtractEnrichAnalysis1 -> library
Execution halted


How can I resolve this package dependency issue? Thanks.





ADD COMMENTlink modified 17 months ago by James W. MacDonald45k • written 17 months ago by elitemao0
gravatar for James W. MacDonald
17 months ago by
United States
James W. MacDonald45k wrote:

That looks like you have a .Rdata file floating around in the directory that you are starting R in. Does starting R in a different directory or by starting R like this:

R --vanilla

to ignore the .Rdata file, and then loading ReactomePA work?

ADD COMMENTlink written 17 months ago by James W. MacDonald45k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 119 users visited in the last hour