Entering edit mode
jvwong
•
0
@jvwong-11844
Last seen 7.4 years ago
Last working version for 'GDCPrepare()' was 2.0.13.
Current version 2.2.0 and 2.2.5 both GDCPrepare() return a function.
```
function (x, df1, df2, ncp, log = FALSE)
{
if (missing(ncp))
.Call(C_df, x, df1, df2, log)
else .Call(C_dnf, x, df1, df2, ncp, log)
}
```
This happens for microRNA datasets. For example,
miRNAquery <- GDCquery(project = "TCGA-SKCM",
data.category = "Transcriptome Profiling",
data.type = "miRNA Expression Quantification")
GDCdownload(miRNAquery)
miRNAmatrix <- GDCprepare(miRNAquery)
returns the function shown above.