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Hello, I want to do tRNA seq analysis with normalized count tRNA data. I want to know the lists of Bioconductor packages that can be used in this analysis. Any help would be of great value to me.
Cross-posted (but with slightly different information) to Biostars https://www.biostars.org/p/497471/
The term "normalized count data" can mean a lot of different things. You need to explain more specifically what data it is that you have and also why you cannot use actual counts.
Anyway, there aren't any packages designed specifically for tRNA. Just use the usual RNA-seq packages.