How to place jplace Querries from EPA RAxML on the tree as branches in Teeio/ggtree?
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Vincent • 0
Last seen 18 months ago

Hi, I have from EPA analyses a .jplace containing my placement results of shorter sequences into a reference tree. I have imported the jplace (read.jplace) using treeio and using get.placements function I can see the best match of each of my querries. However if I use ggtree(filejplace), I only get the original reference tree. How can I add the Querries then as new branches on the tree? Thank you! ```

treeio EPA jplace RAxML ggtree • 301 views

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