Consensus wgcna soft threshold for each data
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2323982403 ▴ 50
@2323982403-11356
Last seen 17 months ago
Ann Arbor

I have a question regarding consensus wgcna. I have three data of interest and want to build consensus network. The soft thresholding plot seemed to suggest different power (eg: if I choose to pick the smallest power that has fit R^2>0.8). For consensus wgcna analysis, is it appropriate to choose different power for individual data set?

Code should be placed in three backticks as shown below


# include your problematic code here with any corresponding output
# please also include the results of running the following in an R session

sessionInfo( )

Transcriptomics WGCNA wgcna • 377 views