Blacklist error at dba.analyze(dbObj)
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Goku • 0
@goku
Last seen 6 months ago

Hi

Can anyone please explain the following error and how to solve it.

Thanks.


> dbObj <- dba.analyze(dbObj)
Applying Blacklist/Greylists...
Genome detected: Hsapiens.UCSC.hg38
Applying blacklist...
Removed: 685 of 260216 intervals.
Counting control reads for greylist...
Blacklist error: Error in value[[3L]](cond): GreyListChIP error: Error in result[[njob]] <- value: attempt to select less than one element in OneIndex


Unable to apply Blacklist/Greylist.
Warning message:
In parallel::mccollect(wait = FALSE, timeout = 1) :
  1 parallel job did not deliver a result

Althought when I use

dba.analyze(dbObj, bBlacklist=F, bGreylist=F)

then there are no errors.

DiffBind ChIPSeq • 213 views
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