Applying exomeCopy to call CNVs withouts controls considering batch effects
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Cheng • 0
@cheng-25188
Last seen 3 days ago
Central

Recently I wanna find CNVs from about 1000 samples whole exome sequencing data with exomeCopy but I have got confused on some details.

1. All my samples are affected, so how can I do the function named generateBackground without any control samples?
2. How can I deal with batch effects using ecomeCopy? 
exomeCopy CNV WES • 35 views
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