Hi all,
I need to import an annotation object containing different UCSC annotation tracks which includes CpG Island, TSS, TFBS and promoters for my DNA Methylation analysis. In table browser I am selecting:
Clade : Mammal
Genome : Human
Assembly : latest one (Currently GRCh38/hg38)
Group: All tracks
Tracks: CpG islands
But I am not able to get the TSS and TFBS.
My question is where to get TSS and TFBS annotations for hg38, and Do I need to create separate bed files for each track and concatenate?
I am first time working with the sequencing data analysis so may be my questions are basic in nature, and I am missing some very common resource for this.
Thanks
Best Rakesh