Hi, I am trying to get amino acid sequence for a protein-isoform from UniProt but not able to find a solution. I can get canonical sequence but the method to obtain isoform sequence is not available.
library(UniProt.ws) up <- UniProt.ws(taxId=9606) select(up, keys = "Q2V2M9", columns = c("SEQUENCE"), keytype = "UNIPROTKB") # select(up, keys = "Q2V2M9-4", columns = c("SEQUENCE"), keytype = "UNIPROTKB") # Isoform id doesn't work. Because it is also not a key in the UniProt object.
Does anyone know if there is a way to get isoform sequence?