Hi, I am new to using flow cytometry data and I'm having trouble achieving my goal.
I want to apply a gate to my flow data (.fcs file) and then subset the data to only have the information in that gate. I'm currently using the flowWorkspac package. At first I tried using gs_cyto_data(), gh_pop_get_data(), and gh_pop_get_indices() but I don’t think I am using them properly as I don’t know how do access the gated information only. I would like to be able to plot only the information in the gated subset afterwards.
Any help/suggestions would be appreciated!