DESeq2 PlotCounts() function
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Nayrouz • 0
@ea088d93
Last seen 24 days ago
Canada

Hello,

Is it possible to label samples when using plotCounts() function? I don't have a lot of samples and so it would be useful to label them.


plotCounts(dds, gene=which.min(res$padj), intgroup="condition")
DESeq2 • 168 views
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swbarnes2 ▴ 920
@swbarnes2-14086
Last seen 16 hours ago
San Diego

PlotCounts does what it does. Learn to use ggplot, you can add labels with that.

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Yes I think we show this in the workflow.

Specifically see the returnData argument.

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