Editing KEGG pathways in R
0
0
Entering edit mode
Jordan • 0
@516457fa
Last seen 22 months ago
United States

Hello,

I'm relatively new to programming and bioinformatics and so far, have learned most of the fundamentals of R, several Bioconductor packages, gene enrichment analysis as well as some of the common pathway databases to map my data over (i.e., KEGG, REACTOME, wikipathways etc). I know how to import and visualize KEGG pathways into R as well as merge them to form a bigger pathway. However, I'm interested in being able to manually edit KEGG pathways to include additional nodes and edges for my study and future analyses, is there a way to accomplish this? I already know about KEGGParser for Matlab, but is there a R methodology for this?

Thanks

KEGG • 770 views
ADD COMMENT

Login before adding your answer.

Traffic: 846 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6