Does anyone know if theres a way for featureCounts to analyse bam files in parallel? I have been running featureCounts for my bam files and its taking so long ( currently on hour 22 and it hasn't went through half the files yet!). I tried to increase the threads and cpu but this has made no improvement to previous attempts. Any help would be greatly appreciated.
Note, I'm using v2.01, I tried updating to subread v2.03 but conda doesn't have the latest version.