readIDAT output to beadarray package input file
1
0
Entering edit mode
Đạt • 0
@e056c6cc
Last seen 4 weeks ago
South Korea

Dear Bioconductor user I want to use the intensity data at the bead level from Iscan. I use readIDAT to read the .idat file to text file with bead ID, mean intensity, and SD. I want to use the Beadarray package to do QC with intensity but it requires a text file with bead id, intensity, and position. The position of the bead is not included as the output of readIDAT.

Has anyone met this situation before? How do you handle this? Thank you very much

```

Beadarray readIDAT • 90 views
ADD COMMENT
0
Entering edit mode
@james-w-macdonald-5106
Last seen 1 day ago
United States

There's a whole vignette about using beadarray to analyze at the bead level. You might start there.

Login before adding your answer.

Traffic: 209 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6