Question

not receive notification after successful push to bioconductor with version bump

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Jiping Wang ▴ 90

@jiping-wang-6687

Last seen 20 months ago

United States

I successfully pushed updates of package RiboDiPA to bioconductor with version bump, but didn't receive automatic notification from bioconductor. Any clues on why?

RiboDiPA • 1.1k views

ADD COMMENT • link 2.3 years ago Jiping Wang ▴ 90

score 2 · Accepted Answer · 2022-01-03

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James W. MacDonald 65k

@james-w-macdonald-5106

Last seen 10 hours ago

United States

You should ask this type of question at bioc-devel@r-project.org rather than on this support site.

I am not sure what automatic notification you expect? I've never got anything like that, but maybe there is a setting I am not familiar with.

ADD COMMENT • link 2.3 years ago James W. MacDonald 65k

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Thanks for input. For example, the following was what I received after submission the package:

"Dear Package contributor,

This is the automated single package builder at bioconductor.org.

Your package has been built on Linux, Mac, and Windows.

Congratulations! The package built without errors or warnings on all platforms.

Please see the build report for more details. This link will be active for 21 days.

Remember: if you submitted your package after July 7th, 2020, when making changes to your repository push to..."

ADD REPLY • link 2.3 years ago Jiping Wang ▴ 90

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or something like

"Received a valid push on git.bioconductor.org; starting a build for commit id: 93b588adba022eaf14549e97a53f45c89d19a8f9" etc from bioc-issue-bot@bioconductor.org

ADD REPLY • link 2.3 years ago Jiping Wang ▴ 90

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You will definitely know if you were able to push. And if you incremented your version, it will build. But the builder doesn't just fire up because you updated. It runs every day and re-builds all the packages that have incremented versions.

ADD REPLY • link 2.3 years ago James W. MacDonald 65k

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If I'm not mistaken that's for just-contributed packages rather than existing ones. Once your package has been accepted it gets built by the 'regular' package builder, and so far as I know there isn't any report sent to you. Although I believe you can get an RSS feed? But anyway, you can just check directly to see it's OK '