Affymetrix chip which is not listed on this webpage
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Yousof • 0
@56d8fe3e
Last seen 5 months ago
Iran

Enter the body of text here Hello BioconductorI need help to solve this problem. Affymetrix Chip (Affymetrix Clariom S Assay) is not listed on this page Affymetrix+Clariom+S+Assay and when run Rstudio and using AffylmGUI packages show Error!!!! you can see the Error image in the attached file.Best regards Honar. Code should be placed in three backticks as shown below


# include your problematic code here with any corresponding output
# please also include the results of running the following in an R session

![enter code here][1]

sessionInfo( )

SingleCellExperiment • 152 views
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@james-w-macdonald-5106
Last seen 2 days ago
United States

You can't use the affy package for Clariom S arrays, but instead have to use the oligo package. I don't believe affylmGUI uses oligo, so you will unfortunately have to use the command line to analyze those arrays.