[ NEED HELP >:( ] ggtree Installation Error
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@25f58905
Last seen 18 months ago
Indonesia

Anyone in here, please help me >:((((

I tried to install ggtree with the given code in here https://bioconductor.org/packages/release/bioc/html/ggtree.html

The installation is works for a while

BiocManager::install("ggtree")
'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details

replacement repositories:
    CRAN: https://cran.usk.ac.id

Bioconductor version 3.15 (BiocManager 1.30.18), R 4.2.1 (2022-06-23 ucrt)
Installing package(s) 'ggtree'
trying URL 'https://bioconductor.org/packages/3.15/bioc/bin/windows/contrib/4.2/ggtree_3.4.2.zip'
Content type 'application/zip' length 912374 bytes (890 KB)
downloaded 890 KB

package ‘ggtree’ successfully unpacked and MD5 sums checked

BUT, when I call the library, then the R said :

Error: package or namespace load failed for ‘ggtree’:
 object ‘patchworkGrob’ is not exported by 'namespace:patchwork'

I also tried this thread to solve my problem but still like that >:(((

ggtree install

My latest R version is 4.2.1 (2022-06-23)

ggtree • 1.2k views
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I couldn't reproduce this. Could you share your sessionInfo() ? Or perhaps trying to reinstall patchwork and then library

install('patchwork')
library(ggtree)
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