ggcyto::scale_x_logicle() not converging

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philippe.hauchamps ▴ 10

@3f07a47d

Last seen 7 months ago

Belgium

Hi dear Bioc support community,

I am currently in the process of submitting a new package to Bioc, CytoPipeline, which depends on ggcyto::scale_x_logicle().

Since the new 3.16 release, and in 3.17 devel, this function does not work anymore, regardless of the inputs I provide to it. I constantly receive error messages like the following:

Error: Logicle Exception: T = 262144.000000, W = 2.000000, M = 6.420000, A = 0.000000
   DidNotConverge: scale() didn't converge

I can see that the same error occurs in ggcyto vignette building in the Bioc builds (see e.g. here )

Is there any plan to solve this soon ?

Thanks a lot,

Philippe

ggcyto • 615 views

ADD COMMENT • link updated 17 months ago by shepherl 3.8k • written 17 months ago by philippe.hauchamps ▴ 10

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You would have to ask the maintainer of the ggcyto package. They will have gotten auto notifications from the build system and will eventually be notified by core team member but I highly recommend sending an email to let them know you are waiting for the fix.

ADD REPLY • link 17 months ago shepherl 3.8k

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