Installing edgeR on M1 mac
0
0
Entering edit mode
Onur • 0
@5eb28202
Last seen 16 months ago
Netherlands

Hi everyone,

I am trying to install edgeR on my M1 Mac, however I got this error:

Loading required package: limma
Error: package or namespace load failed for ‘edgeR’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/edgeR/libs/edgeR.so':
  dlopen(/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/edgeR/libs/edgeR.so, 6): Symbol not found: __ZNKSt3__115basic_stringbufIcNS_11char_traitsIcEENS_9allocatorIcEEE3strEv
  Referenced from: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/edgeR/libs/edgeR.so (which was built for Mac OS X 13.0)
  Expected in: /usr/lib/libc++.1.dylib

I see that it was built for Mac OS X 13 whereas I have 11.7 installed on my PC.

The problem is I can't upgrade it as the company IT does not allow it. Is there a way to get around this problem? I also tried to find older versions of edgeR, I managed to get 3.19 work but few functions that I need were not introduced in this version, so I think that I need at least 3.32 or higher.

Thank you very much,

Onur

edgeR • 579 views
ADD COMMENT

Login before adding your answer.

Traffic: 1025 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6