ReactomeGSA for RNASeq
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@14ef1b09
Last seen 8 weeks ago
Egypt

I have RNA-Seq data that is collected from different centers and I want to analyze it using ReactomeGSA-Camera but I am not sure how to adjust for batch effect and unwanted variation on the web tool. I already performed RUVg correction for that purpose and I have a matrix of estimated factors of unwanted variation. However, when I insert these factors in the sample annotation on ReactomeGSA, it gives me this error.

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ReactomeGSA BatchEffect RNASeqData • 145 views
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