Hi,

I'm trying to overlay coverage and sashimi plots for group of RNA-Seq samples (replicates) so that I can have multiple treatment visualized in one simple plot with Gviz.

I need to set the coverage ylims to the max of the range of the overlayed plots, similar to how Florian and Robert are doing in this Gviz example. However, I'm not sure are to retrieve the values of the coverage plot... which would be determine by the region of the genome during rendering...

Also, I would love to be able to display the sashimi counts as a comma delimited list of values. I see a sashimiTransformation display parameter that I'm guessing would take a function that could be used, i'm guessing again, to modify the the sashimi counts.

Anyhow, looking forward to hearing your suggestions.