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Question: Epigenetic clock (Horvath): package?
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gravatar for Brian Smith
17 months ago by
Brian Smith120
United States
Brian Smith120 wrote:

Hi,

I was working with some illumina EPIC data and trying to determine the epigenetic age of samples for whole blood. I know that on Horvath's website there is an online calculator for whole blood, but the code doesn't seem to be provided. Also, in the vignette for minfi, in section "Other stuff" there is a sub-heading 'Horvath Age Estimation'. Has this been implemented in minfi? Or is there any other package that implements the epigenetic clock algorithm?

 

thanks!

ADD COMMENTlink modified 16 months ago by Wade Davis60 • written 17 months ago by Brian Smith120
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gravatar for Wade Davis
16 months ago by
Wade Davis60
USA
Wade Davis60 wrote:

I would willing to put effort into this (along with others in my group) if we can get some of the underlying code, particularly the "advanced method" which is only available in the online calculator.

 

Wade

ADD COMMENTlink written 16 months ago by Wade Davis60
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