Question: Setting relevel with the JunctionSeq package
0
gravatar for Assa Yeroslaviz
2.2 years ago by
Assa Yeroslaviz1.4k
Munich, Germany
Assa Yeroslaviz1.4k wrote:

Hi,

I was wondering if there is a way to set a reference in the function runJunctionSeqAnalysis, like it can be done in DESeq. in the manual it says it will always regards the first factor as  the reference.

But what if I want to have the second factor as a reference. Is there  a way to set this in the command (or before)

thanks

Assa

reference relevel junctionseq • 303 views
ADD COMMENTlink written 2.2 years ago by Assa Yeroslaviz1.4k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 154 users visited in the last hour