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Question: Setting relevel with the JunctionSeq package
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gravatar for Assa Yeroslaviz
4 weeks ago by
Assa Yeroslaviz1.3k
Munich, Germany
Assa Yeroslaviz1.3k wrote:

Hi,

I was wondering if there is a way to set a reference in the function runJunctionSeqAnalysis, like it can be done in DESeq. in the manual it says it will always regards the first factor as  the reference.

But what if I want to have the second factor as a reference. Is there  a way to set this in the command (or before)

thanks

Assa

ADD COMMENTlink written 4 weeks ago by Assa Yeroslaviz1.3k
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