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Question: Python Module from Kim and Volsky (2005) PAGE: Parametric Analysis of Gene Set Enrichment paper?
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gravatar for danielle.newby
10 months ago by
danielle.newby0 wrote:

Hi,

I was wondering if anyone knew where the python module is to carry out pathway analysis using the methods in the paper by Kim and Volsky (2005) in their paper "PAGE: Parametric Analysis of Gene Set Enrichment paper"? It is not clear if they produced a python module from the paper and if they did i have not been able to find it!

Any help would be great to point me in the right direction

Thanks

Danielle

ADD COMMENTlink modified 10 months ago by Guido Hooiveld2.2k • written 10 months ago by danielle.newby0
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gravatar for Guido Hooiveld
10 months ago by
Guido Hooiveld2.2k
Wageningen University, Wageningen, the Netherlands
Guido Hooiveld2.2k wrote:

FYI, since you ask at the Bioconductor forum: I know that the PAGE algorithm has been implemented in the package PGSEA.

ADD COMMENTlink modified 10 months ago • written 10 months ago by Guido Hooiveld2.2k
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