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stats134711
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@stats134711-12832
Last seen 7.0 years ago
I'm using SRAdb to download the SRA files from Accession SRP002480. This is quite a large set of files, but I'm only interested in downloading the files for body site = "human skin". In the RunInfo Table, it is coded as "body_site_s" = "human skin". How can I extract only those files?
library(SRAdb)
library(DBI)
srafile = getSRAdbFile()
con = dbConnect(RSQLite::SQLite(), srafile)
getSRAfile('SRP002480',con,fileType='sra')