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Question: RNAseq read coverage plot: What tool?
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gravatar for alakatos
7 months ago by
alakatos80
United States
alakatos80 wrote:

Hello All, 

I would like to generate a similar RNAseq read coverage plot  (attached) of a gene  for multiple samples (12). 

Would you please recommend a tool in Bioconductor?

 

plot  http://imgur.com/bpxTOow

Thanks  a lot,

Anita

ADD COMMENTlink modified 7 months ago by Ou, Jianhong1000 • written 7 months ago by alakatos80

Thank you all for your help.

Anita

 

ADD REPLYlink written 7 months ago by alakatos80
0
gravatar for James W. MacDonald
7 months ago by
United States
James W. MacDonald45k wrote:

Gviz or ggbio
 

ADD COMMENTlink written 7 months ago by James W. MacDonald45k
0
gravatar for Ou, Jianhong
7 months ago by
Ou, Jianhong1000
United States
Ou, Jianhong1000 wrote:

Givz or trackViewer?

ADD COMMENTlink written 7 months ago by Ou, Jianhong1000
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