Installation of samr package on R v3.4 mac OS Sierra
1
0
Entering edit mode
tommykeves • 0
@tommykeves-13134
Last seen 4.2 years ago

I am trying to install samr package on a macOS system R v3.4, but I get this warning message "Warning in install.packages :
  installation of package ‘samr’ had non-zero exit status. 

Consequently, R doesn't recognize the command library(samr)

What should I do to handle this problem ?

thanks 

T

Here is the full warning message:

Package which is only available in source form, and may need compilation of
  C/C++/Fortran: ‘samr’
Do you want to attempt to install these from sources?
y/n: y
installing the source package ‘samr’

trying URL 'https://cran.rstudio.com/src/contrib/samr_2.0.tar.gz'
Content type 'application/x-gzip' length 36702 bytes (35 KB)
==================================================
downloaded 35 KB

* installing *source* package ‘samr’ ...
** libs
gfortran   -fPIC  -g -O2  -c rankcol.f -o rankcol.o
make: gfortran: No such file or directory
make: *** [rankcol.o] Error 1
ERROR: compilation failed for package ‘samr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.4/Resources/library/samr’
Warning in install.packages :
  installation of package ‘samr’ had non-zero exit status

 

samr • 1.8k views
ADD COMMENT
0
Entering edit mode
@danielvantwisk-13028
Last seen 13 months ago

Possible solutions:

1.) Be sure you have the latest version of xcode installed before installing R packages from source.

2.) The following answer on stackoverflow may be a solution to your problem: https://stackoverflow.com/a/37754162

 

ADD COMMENT

Login before adding your answer.

Traffic: 669 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6