Hello, I am doing a temporal analysis of my RNA seq data:
NBp <- p.vector(matrix_counts, design, counts=TRUE)
NBt <- T.fit(NBp)
"s" is a dataframe which contains the significant genes for each comparison, each experimental group vs. the control group.
I got around 6000 genes for each comparison but I need to select the most important or significant ones. Are the results in descendent order of significance? Can I select for example the 30 first rows (genes)? or how many should I select? If they are not in a particular order, what should I do to get a loweramount of genes?