How to extract DEG using limma at threshold value p<0.05 and fold change >1.5 ?
1
0
Entering edit mode
rkp • 0
@rkp-10175
Last seen 6.2 years ago

How to extract top DEG using limma at threshold value p<0.05 and fold change >1.5 ?

I request you all too kindly suggest the R script for topTable.

topTable(fit2, coef=2, ……?????????)

Thanking you.

 

limma microarray R bioconductor • 839 views
ADD COMMENT
0
Entering edit mode
Aaron Lun ★ 28k
@alun
Last seen 8 hours ago
The city by the bay

Read the documentation in ?topTable.

ADD COMMENT

Login before adding your answer.

Traffic: 1043 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6