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Question: How to extract DEG using limma at threshold value p<0.05 and fold change >1.5 ?
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gravatar for rkp
4 months ago by
rkp0
rkp0 wrote:

How to extract top DEG using limma at threshold value p<0.05 and fold change >1.5 ?

I request you all too kindly suggest the R script for topTable.

topTable(fit2, coef=2, ……?????????)

Thanking you.

 

ADD COMMENTlink modified 4 months ago by Aaron Lun16k • written 4 months ago by rkp0
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gravatar for Aaron Lun
4 months ago by
Aaron Lun16k
Cambridge, United Kingdom
Aaron Lun16k wrote:

Read the documentation in ?topTable.

ADD COMMENTlink written 4 months ago by Aaron Lun16k
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