I have generated a QC report on my 35 samples (28 ChIP and 7 input samples) using:
How do I generate plots with the corresponding input file on one graph?
For example: CCPlot seems to have all samples and only have 1 legend replicate.
My sample sheet and the plots generate can be downloaded from here: https://1drv.ms/f/s!Aiu_09KS3rmGi3zTZVMoE7X2nZIQ
Thank you in advance for your help!