How to install BiocInstaller_1.22.3 on mac OSX yosemite
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@nakanomasayuki265-13274
Last seen 6.8 years ago

I used Yosemite macOS10.10.5.

 

I would like to install BiocInstaller_1.22.3.

I tried following command, but failed.

What is the wrong command?

 

install.packages("http://bioconductor.org/packages/3.3/bioc/bin/macosx/yosemite/contrib/3.3/BiocInstaller_1.22.3.zip", repos=NULL)

 

Warning in install.packages :
  URL 'http://bioconductor.org/packages/3.3/bioc/bin/macosx/yosemite/contrib/3.3/BiocInstaller_1.22.3.zip': status was '404 Not Found'
Error in download.file(p, destfile, method, mode = "wb", ...) : 
  cannot download all files
Error in install.packages : type == "both" cannot be used with 'repos = NULL'

I tried mavericks instead of yosemite, but failed.

R • 588 views
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Mike Smith ★ 6.5k
@mike-smith
Last seen 4 hours ago
EMBL Heidelberg

Have you tried the standard Bioconductor way of installing? e.g.

source("http://www.bioconductor.org/biocLite.R")

For most other packages you'd then do:

biocLite("MyPackageName")

but for BiocInstaller you don't need to as it's installed by the first script.

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