I am trying to install a package so I can continue a bioconductor course. Unfortunately it's not working. I get the following line:
> source("https://bioconductor.org/biocLite.R")
Bioconductor version 3.5 (BiocInstaller 1.26.0), ?biocLite for help
> biocLite("tissuesGeneExpression")
BioC_mirror: https://bioconductor.org
Using Bioconductor 3.5 (BiocInstaller 1.26.0), R 3.4.1 (2017-06-30).
Installing package(s) 'tissuesGeneExpression'
Warning: unable to access index for repository https://www.stats.ox.ac.uk/pub/RWin/src/contrib:
cannot open URL 'https://www.stats.ox.ac.uk/pub/RWin/src/contrib/PACKAGES'
Warning: unable to access index for repository https://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.4:
cannot open URL 'https://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.4/PACKAGES'
Warning: unable to access index for repository https://www.stats.ox.ac.uk/pub/RWin/src/contrib:
cannot open URL 'https://www.stats.ox.ac.uk/pub/RWin/src/contrib/PACKAGES'
Warning message:
package 'tissuesGeneExpression' is not available (for R version 3.4.1)
> sessionInfo()
R version 3.4.1 (2017-06-30)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows >= 8 x64 (build 9200)
Matrix products: default
locale:
[1] LC_COLLATE=Dutch_Netherlands.1252 LC_CTYPE=Dutch_Netherlands.1252
[3] LC_MONETARY=Dutch_Netherlands.1252 LC_NUMERIC=C
[5] LC_TIME=Dutch_Netherlands.1252
attached base packages:
[1] stats4 parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] gwascat_2.8.0 Homo.sapiens_1.3.1
[3] TxDb.Hsapiens.UCSC.hg19.knownGene_3.2.2 org.Hs.eg.db_3.4.1
[5] GO.db_3.4.1 OrganismDbi_1.18.0
[7] GenomicFeatures_1.28.4 AnnotationDbi_1.38.1
[9] Biobase_2.36.2 BiocInstaller_1.26.0
[11] SNPlocs.Hsapiens.dbSNP144.GRCh37_0.99.20 BSgenome_1.44.0
[13] rtracklayer_1.36.4 Biostrings_2.44.1
[15] XVector_0.16.0 GenomicRanges_1.28.4
[17] GenomeInfoDb_1.12.2 IRanges_2.10.2
[19] S4Vectors_0.14.3 BiocGenerics_0.22.0
loaded via a namespace (and not attached):
Error in x[["Version"]] : subscript out of bounds
In addition: Warning message:
In FUN(X[[i]], ...) :
DESCRIPTION file of package 'Rcpp' is missing or broken
