Question: Extracting subclusters from original data
0
gravatar for Mina
24 months ago by
Mina0
Mina0 wrote:

I am analyzing a nontargeted metabolomic data set using ComplexHeatmap. After I made a heatmap of all identified metabolites, I decided to continue the analyses only of compounds that are in one cluster. How do I extract the data from e.g. Cluster1 and make a new dataframe out of it?

ADD COMMENTlink modified 24 months ago by sina.nassiri70 • written 24 months ago by Mina0
Answer: Extracting subclusters from original data
0
gravatar for sina.nassiri
24 months ago by
sina.nassiri70
Switzerland/Lausanne
sina.nassiri70 wrote:

I'm not familiar with ComplexHeatmap, but if it produces a tree (as resulting from hclust e.g.) you can directly pass it to cutree().

ADD COMMENTlink written 24 months ago by sina.nassiri70

Thank you Sina.  That did help.

ADD REPLYlink written 24 months ago by Mina0
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