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Question: Tools for classifying reads from xenograft samples?
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gravatar for alakatos
18 months ago by
alakatos80
United States
alakatos80 wrote:

Hello All, 

I must separate human and mouse RNAs obtained by RNAseq from a tissue after xenotransplantation (human NSCs to mouse model). 

Would you please suggest Bioconductor or other tools for classifying reads from xenograft samples? What is the recommended read depth and length for this kind of analysis?

Thank you for your help,

Anita 

rnaseq xenograph • 456 views
ADD COMMENTlink written 18 months ago by alakatos80
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