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Question: "NNG[A|G][A|G]N$" in CRISPRseek code
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gravatar for bhanson1806
4 months ago by
bhanson18060 wrote:

Good day

I would like to know what the $ and | signs stand for in the "NNG[A|G][A|G]N$" portion, pertaining to the SaCas9 PAM recognition motif, of the CRISPRseek code?

 

Many thanks

Britt

ADD COMMENTlink modified 4 months ago • written 4 months ago by bhanson18060
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gravatar for Julie Zhu
4 months ago by
Julie Zhu3.8k
United States
Julie Zhu3.8k wrote:
Britt, $ indicates the end of the string and | stands for or in pattern specification. Best regards, Julie From: "bhanson1806 [bioc]" <noreply@bioconductor.org> Reply-To: "reply+85fec19f+code@bioconductor.org" <reply+85fec19f+code@bioconductor.org> Date: Wednesday, August 2, 2017 at 1:06 PM To: "Zhu, Lihua (Julie)" <julie.zhu@umassmed.edu> Subject: [bioc] "NNG[A|G][A|G]N$" in CRISPRseek code Activity on a post you are following on support.bioconductor.org<https: support.bioconductor.org=""> User bhanson1806<https: support.bioconductor.org="" u="" 11727=""/> wrote Question: "NNG[A|G][A|G]N$" in CRISPRseek code<https: support.bioconductor.org="" p="" 98769=""/>: Good day I would like to know what the $ and | signs stand for in the "NNG[A|G][A|G]N$" portion, pertaining to the SaCas9 PAM recognition motif, of the CRISPRseek code? Many thanks Britt ________________________________ Post tags: crisprseek, SaCas9, PAM You may reply via email or visit "NNG[A|G][A|G]N$" in CRISPRseek code
ADD COMMENTlink written 4 months ago by Julie Zhu3.8k
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gravatar for bhanson1806
4 months ago by
bhanson18060 wrote:

Dear Julie

Thank you so much for your response! 

Kind regards
Britt

ADD COMMENTlink written 4 months ago by bhanson18060
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