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Question: Problems with packages that need libgfortran.so.3
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gravatar for rnociti
13 months ago by
rnociti0
rnociti0 wrote:

I'm running R in Fedora 26 and it uses libgfortran.so.4 and the packages such as DESeq2 and clusterProfiler needs libgfortran.so.3, when I tried to install those packages the following error appears:

libgfortran.so.3: cannot open shared object file: No such file or directory.

Can anyone help me?

 

ADD COMMENTlink modified 13 months ago by Martin Morgan ♦♦ 22k • written 13 months ago by rnociti0

Are you installing packages using

BiocInstaller::biocLite("DESEq2")

? If so, then the packages are compiled on your machine using your version of libgfortran. So the error points to a configuration issue on your machine; how did you install libgfortran?

ADD REPLYlink written 13 months ago by Martin Morgan ♦♦ 22k
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