Recently, I tried to follow the steps described in "User instructions and tutorials of the synergyfinder package", Authors: Liye He, Krister Wennerberg, Tero Aittokallio1, and Jing Tang, using data file called "mathews_screening_data" as an example. I succeeded to obtain the results at each step described in the paper mentioned above with this data file.
My question is the following: How to load my own input data file and to follow the same steps : input data, input data visualization, drug synergy scoring, visualization of sinergy scores.
I tried to do this, but the message error is that my file is not found !
I would appreciate any hint. Thanks, Gabriel