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News: ensembl 90 gtfs and fasta twobits have been added to AnnotationHub
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gravatar for shepherl
13 months ago by
shepherl ♦♦ 830
United States
shepherl ♦♦ 830 wrote:

Hello all, 

The ensembl 90 gtf (converted to GRanges on the fly) and fasta (twobit files) been added to AnnotationHub and are currently available in Bioc3.6 (development) 

 

> hub = AnnotationHub()
snapshotDate(): 2017-08-28
> length(query(hub, c("ensembl", "gtf", "release-90")))
[1] 248
> length(query(hub, c("fasta", "release-90", "twobit"))) 
[1] 413
ADD COMMENTlink modified 13 months ago by Martin Morgan ♦♦ 22k • written 13 months ago by shepherl ♦♦ 830
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