Closed:error with rbind fill in Mac
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@bioinformatics-10931
Last seen 2.2 years ago
United States

I am using a package from Bioconductor. When I use Mac , I get an error like below even with the example data they provided.

> Error: All inputs to rbind.fill must be data.frames

I have been searching to find what might cause such a problem. I upgraded my R and R studio. Is there anyone who could help ?

    > sessionInfo()
    R version 3.4.1 (2017-06-30)
    Platform: x86_64-apple-darwin15.6.0 (64-bit)
    Running under: macOS Sierra 10.12.6
    
    Matrix products: default
    BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
    LAPACK: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib
    
    locale:
    [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
    
    attached base packages:
    [1] stats     graphics  grDevices utils     datasets  methods   base     
    
    other attached packages:
    [1] bindrcpp_0.2 TPP_3.4.3    tidyr_0.7.0  magrittr_1.5 dplyr_0.7.2 
    
    loaded via a namespace (and not attached):
     [1] tidyselect_0.2.0     purrr_0.2.3          reshape2_1.4.2      
     [4] splines_3.4.1        lattice_0.20-35      colorspace_1.3-2    
     [7] htmltools_0.3.6      stats4_3.4.1         rlang_0.1.2         
    [10] foreign_0.8-69       glue_1.1.1           BiocGenerics_0.22.0 
    [13] RColorBrewer_1.1-2   lambda.r_1.1.9       foreach_1.4.3       
    [16] bindr_0.1            plyr_1.8.4           stringr_1.2.0       
    [19] munsell_0.4.3        gtable_0.2.0         futile.logger_1.4.3 
    [22] psych_1.7.5          codetools_0.2-15     VGAM_1.0-4          
    [25] evaluate_0.10.1      Biobase_2.36.2       knitr_1.17          
    [28] biobroom_1.8.0       doParallel_1.0.10    parallel_3.4.1      
    [31] broom_0.4.2          Rcpp_0.12.12         scales_0.5.0        
    [34] backports_1.1.0      limma_3.32.5         gridExtra_2.2.1     
    [37] mnormt_1.5-5         ggplot2_2.2.1        digest_0.6.12       
    [40] stringi_1.1.5        openxlsx_4.0.17      grid_3.4.1          
    [43] rprojroot_1.2        nls2_0.2             tools_3.4.1         
    [46] bitops_1.0-6         lazyeval_0.2.0       RCurl_1.95-4.8      
    [49] tibble_1.3.4         futile.options_1.0.0 sme_0.8             
    [52] pkgconfig_2.0.1      MASS_7.3-47          data.table_1.10.4   
    [55] assertthat_0.2.0     rmarkdown_1.6        iterators_1.0.8     
    [58] R6_2.2.2             VennDiagram_1.6.17   nlme_3.1-131        
    [61] compiler_3.4.1 

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