submitting a BSgenome package
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@eb47bc69
Last seen 10 weeks ago
United States

I am trying to submit a New BSgenome but the 2bit document is to big and GitHub won't let me do it. Any hints on that would be appreciated! Thanks in advance.

BSgenome • 285 views
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@herve-pages-1542
Last seen 2 days ago
Seattle, WA, United States

Hi,

What organism/assembly is it? If it's a UCSC genome, I can wrap the package for you.

Otherwise put the package source tarball somewhere where I can access it. This is how we've managed contributed BSgenome data packages so far.

Note that the plan is to eventually refactor the current approach and have BSgenome data packages pull the sequence data from AnnotationHub instead of having it embedded in the package. This has been on the radar for a while, just need to find the time to work on this.

Thanks,

H.

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Hi, Thanks a lot, but I already figured it out how to push to Git, so everything should ready to go.

Thanks, Deisiany

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Good. So where should I get the package from? Thx

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