How to liftOver Paired BED (bedpe) data
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@mikhail-dozmorov-23744
Last seen 15 hours ago
United States

BEDPE format contains genomic coordinates for pairs of interactions. rtracklayer::liftOver() fails on Pairs object. Attempt to liftOver pairs separately and then merge was also unsuccessful. This was discussed on Slack, but still no solution. Some data and code to illustrate. Any advice?

CC Michael Lawrence

rtracklayer • 400 views
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