I've run gseGO on my gene list and would like to find a nice way to show my results, I've always find it hard to display GSEA results. Emapplot seems to be a nice option however, as every other function that I know to display GSEA results from clusterProfiler, it shows both terms with a positive or negative NES, but I would like to be able to show the terms that are enriched in one or the other category of my diffferential expression analysis.
Is there anyway to do so? Is there other type of plots where this is possible?
(I've trie to subset terms with negative NES for example but emapplot doesn't work on data.frame, and I've not found a parameter of emapplot sying which term to display)
Thanks a lot!