Deleted:champ.norm task 1 failed - "could not find function "blc""
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@坤-24488
Last seen 3.2 years ago

When using champ.norm to process the data, the following error occurred

Here is the error message that I get:

myNorm <- champ.norm(beta=myLoad$beta,arraytype="450K",cores=5

[===========================]

<h2>[>>>>> ChAMP.NORM START <<<<<<]</h2>

champ.norm Results will be saved in ./CHAMP_Normalization/ [ SWAN method call for BOTH rgSet and mset input, FunctionalNormalization call for rgset only , while PBC and BMIQ only needs beta value. Please set parameter correctly. ]

<< Normalizing data with BMIQ Method >>

Note that,BMIQ function may fail for bad quality samples (Samples did not even show beta distribution).

5 cores will be used to do parallel BMIQ computing.

Error in champ.BMIQ(beta[, x], design.v, sampleID = colnames(beta)[x], :

task 1 failed - "could not find function "blc""

thanks,

ChAMP • 698 views
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