Question

Error by installing BiocManager

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adklts • 0

@adklts-21974

Last seen 3.0 years ago

Good afternoon. I want to run an older R shiny app that using BiocInstaller, Now with R 3.6, I cannot use BiocInstaller but BiocManager. I try to install everything with Biocmanager I am resolving the warning about the packages, and then when I try again to run the app all the time I am getting

Error: With R version 3.5 or greater, install Bioconductor packages using BiocManager; see https://bioconductor.org/install

And I follow again the same routine and I get the same mistake...Does please anybody know to help me?

BiocInstaller BiocManager Bioconductor • 1.1k views

ADD COMMENT • link 3.3 years ago adklts • 0

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You will have to do more than saying that something doesn't do what you expect. You need to show exactly what you are doing and what results you get.

ADD REPLY • link 3.3 years ago James W. MacDonald 65k

score 1 · Answer 1 · 2021-01-13

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shepherl 3.8k

@lshep

Last seen 12 hours ago

United States

Have you also searched your shiny app code for any references BiocInstaller and related functions (like biocLite) that would need updating?