11
votes
2
answers
809
views
8 follow
2
answers
13
votes
2
answers
16k
views
8 follow
2
answers
heatmap.2() get matrix after hierarchical clustering
clustering written 5.3 years ago by Guest User12k • updated 5.3 years ago by Thomas Girke1.6k
10
votes
2
answers
2.3k
views
8 follow
2
answers
CAMERA error: $ operator not defined for this S4 class
camera software error written 2.6 years ago by scott.walmsley60 • updated 2.5 years ago by ckuhl20
13
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2
answers
1.2k
views
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2
answers
13
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6
answers
5.9k
views
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6
answers
24
votes
3
answers
2.2k
views
8 follow
3
answers
voom for spectral counts
proteomics limma massspectrometry voom spectral counts written 3.0 years ago by Ben Neely40 • updated 3.0 years ago by Gordon Smyth32k
9
votes
5
answers
1.4k
views
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5
answers
arrayQualityMetrics does not complete successfully
arrayqualitymetrics written 23 months ago by Jan-Niklas10 • updated 14 months ago by fmunoz10
6
votes
3
answers
1.7k
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7 follow
3
answers
0
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1
answer
518
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1
answer
8
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3
answers
1.7k
views
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3
answers
Pathview: *** caught segfault *** cause 'memory not mapped'
pathview segfault written 2.1 years ago by user3188830 • updated 18 months ago by redpick1340
17
votes
2
answers
1.4k
views
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2
answers
Limma camera function never gives any differentially expressed gene sets
limma written 2.5 years ago by chris86340 • updated 5 months ago by misterrandyclark0
7
votes
1
answer
3.5k
views
7 follow
1
answer
Removing batch effects with sva and combat using the sva package
regression limma sva written 6.1 years ago by Jeff Leek490 • updated 6.1 years ago by Andrew Teschendorff60
3
votes
1
answer
3.3k
views
7 follow
1
answer
support for EPIC methylation arrays in minfi
minfi written 22 months ago by Kasper Daniel Hansen6.3k • updated 17 months ago by line.heylen10
9
votes
5
answers
5.3k
views
7 follow
5
answers
RNA-Seq, generate batch-free count matrix
edger sva written 3.5 years ago by Brian Haas50 • updated 3.3 years ago by Gordon Smyth32k
0
votes
1
answer
1.2k
views
7 follow
1
answer
5
votes
1
answer
1.1k
views
7 follow
1
answer
Trouble with Tximport
salmon tximport written 21 months ago by smithng121530 • updated 21 months ago by Michael Love15k
2
votes
4
answers
2.4k
views
7 follow
4
answers
Minfi error in reading Basename column
minfi methylation written 2.4 years ago by parap0 • updated 15 months ago by SplittingInfinity0
11
votes
1
answer
444
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 18 months ago by yi.huang30 • updated 18 months ago by Gordon Smyth32k
10
votes
3
answers
8.9k
views
7 follow
3
answers
1
vote
2
answers
1.4k
views
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2
answers
Problem installing BSgenome.Hsapiens.UCSC.hg19
software error written 2.4 years ago by mhwaldron10410 • updated 2.3 years ago by Arne Muller20
3
votes
2
answers
11k
views
7 follow
2
answers
Problems updating Bioconductor with R 3.2.0
r update upgrade written 2.8 years ago by daniil.sarkisyan10 • updated 2.8 years ago by Dan Tenenbaum ♦♦ 8.2k
11
votes
6
answers
1.6k
views
7 follow
6
answers
9
votes
2
answers
2.5k
views
7 follow
2
answers
Deseq2 error estimating size factors -- zeros in count matrix
deseq2 estimatesizefactors written 2.0 years ago by ssabri10 • updated 2.0 years ago by Michael Love15k
0
votes
5
answers
1.0k
views
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5
answers
package 'ChAMP' demo/test code fails at champ.CNA()
software error written 3.0 years ago by Hamid Bolouri90 • updated 12 months ago by Yuan Tian70
0
votes
1
answer
617
views
7 follow
1
answer
more stupid *Ranges questions...
transcription chippeakanno genomicranges written 6.4 years ago by Tim Triche4.2k • updated 6.4 years ago by Michael Lawrence9.9k
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