1
vote
2
answers
723
views
2
answers
pre-ranked GSEA within R: options?
written 4.5 years ago by Daniel Schmolze20 • updated 17 hours ago by atakanekiz20
3
votes
2
answers
64
views
2
answers
0
votes
1
answer
46
views
1
answer
weights must be finite positive value
edger estimatedispersions written 2 days ago by nonCodingGene10 • updated 2 days ago by Aaron Lun20k
2
votes
1
answer
1.3k
views
1
answer
0
votes
1
answer
41
views
1
answer
DeSeq2 installation on ubuntu fails
deseq2 R bioconductor ubuntu rstudio written 5 days ago by drumarsohail0 • updated 5 days ago by Michael Love18k
0
votes
1
answer
53
views
1
answer
RPKM representation in heatmap is not accurate
heatmap.2 z-score written 6 days ago by ayamani0 • updated 5 days ago by Aaron Lun20k
1
vote
1
answer
29
views
1
answer
0
votes
1
answer
47
views
1
answer
0
votes
1
answer
28
views
1
answer
Tximport Input file
tximport written 4 days ago by akhilkrishnavs0 • updated 4 days ago by Michael Love18k
1
vote
1
answer
34
views
1
answer
GSVA with NanoString nCounter Data - Pre-Processing
preprocessing gsva nanostring written 3 days ago by seblatt0 • updated 2 days ago by Robert Castelo2.2k
1
vote
1
answer
45
views
1
answer
0
votes
1
answer
42
views
1
answer
Basemean always multiples of 0.5 in deseq2 results
deseq results basemean written 4 days ago by batmaiden0 • updated 4 days ago by Michael Love18k
1
vote
1
answer
38
views
1
answer
SCRAN - Question: Error when calling cosineNorm through fastMNN
scran mnncorrect fastmnn written 4 days ago by tobi0 • updated 4 days ago by Aaron Lun20k
0
votes
1
answer
59
views
1
answer
time-series, no replicates, no control groupe
deseq2 without replicate time-series written 4 days ago by bahlv0 • updated 4 days ago by Michael Love18k
0
votes
1
answer
32
views
1
answer
MSGFplus: fail to load on Mac OSX 10.13.6 due to javaVersion error
java mac msgfplus written 6 days ago by dgemoets0 • updated 5 days ago by Mike Smith2.8k
1
vote
1
answer
59
views
1
answer
Multiple comparisons with DESeq2
deseq2 written 2 days ago by spr0 • updated 2 days ago by Michael Love18k
0
votes
1
answer
69
views
1
answer
DEXSeq: Error running dexseq_prepare_annotation.py
dexseq written 7 days ago by suzanne110 • updated 4 days ago by Alejandro Reyes1.6k
0
votes
1
answer
18
views
1
answer
MethylKit DSS Package
methylation R bioconductor methylkit written 3 days ago by nilaycan0 • updated 2 days ago by altuna akalin10
1
vote
1
answer
25
views
1
answer
2
votes
1
answer
42
views
1
answer
1
vote
1
answer
43
views
1
answer
AnnotationHub, force update snapshot date?
annotationhub written 4 days ago by Vang Le70 • updated 4 days ago by shepherl ♦♦ 640
0
votes
1
answer
24
views
1
answer
Help with design for 2 controls in infection time points with deseq2
deseq2 written 7 days ago by diya.sen0 • updated 6 days ago by Michael Love18k
0
votes
1
answer
42
views
1
answer
single cell RNA-seq pipeline
rnaseq scrna-seq written 3 days ago by Bogdan490 • updated 2 days ago by Aaron Lun20k
1
vote
1
answer
51
views
1
answer
0
votes
1
answer
60
views
1
answer
Advice on DESeq2 design
deseq2 written 3 days ago by pocket.change.j0 • updated 2 days ago by Michael Love18k
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