14
votes
6
answers
1.5k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 20 months ago by florian.noack60 • updated 22 days ago by Rory Stark2.1k
2
votes
1
answer
93
views
1
answer
7
votes
1
answer
119
views
1
answer
From RleList to RleArray
rle rlelist delayedarray written 20 days ago by davide risso520 • updated 20 days ago by Peter Hickey290
4
votes
1
answer
357
views
1
answer
3
votes
1
answer
117
views
1
answer
clusterProfiler - Non model organism
clusterprofiler written 21 days ago by rozanskide10 • updated 21 days ago by Guangchuang Yu800
4
votes
1
answer
93
views
1
answer
Rsubread counting peaks ATACseq
rsubread narrowpeaks featurecounts atac-seq written 8 days ago by j.bergenstrahle70 • updated 8 days ago by Wei Shi2.7k
3
votes
1
answer
134
views
1
answer
1
vote
2
answers
107
views
2
answers
1
vote
1
answer
93
views
1
answer
PCA from TPM
pca tpm tximport written 28 days ago by tanyabioinfo10
0
votes
0
answers
30
views
0
answers
3
votes
1
answer
117
views
1
answer
DESeq2 biais when genes are missing from the annotation?
rnaseq deseq2 written 10 days ago by corend0 • updated 9 days ago by Michael Love15k
3
votes
1
answer
142
views
1
answer
0
votes
1
answer
80
views
1
answer
Error scatter when creating SingleCellExperiment
scater written 27 days ago by ines.desantiago0 • updated 27 days ago by Aaron Lun17k
0
votes
0
answers
55
views
0
answers
0
votes
1
answer
45
views
1
answer
0
votes
1
answer
83
views
1
answer
DESeq2: error with DESeqDataSet function
deseq2 error deseqdataset deseqdataset written 22 days ago by Elias Ruiz0 • updated 22 days ago by Michael Love15k
0
votes
1
answer
114
views
1
answer
RNA-seq for DGE
illumina ballgown stringtie hisat2 written 4 days ago by Ammu0 • updated 3 days ago by k.vitting.seerup10
0
votes
1
answer
107
views
1
answer
error with champ.load
champ written 21 days ago by o.giannakopoulou0 • updated 20 days ago by Yuan Tian0
6
votes
1
answer
106
views
1
answer
Comparing one condition to multiple others using DESeq2 contrasts
deseq2 written 23 days ago by thibault.lorin3420 • updated 22 days ago by Sean Davis21k
0
votes
0
answers
200
views
0
answers
0
votes
0
answers
62
views
0
answers
0
votes
1
answer
78
views
1
answer
Appropriate DESeq2 design for multi-factor comparison within group?
deseq deseq2 written 8 days ago by hrishi27n0 • updated 7 days ago by Michael Love15k
0
votes
1
answer
92
views
1
answer
Anova test on gene expression data
anova gene expression written 8 days ago by sally_b860 • updated 8 days ago by James W. MacDonald45k
0
votes
2
answers
95
views
2
answers
0
votes
0
answers
78
views
0
answers
queries reg R program
limma written 13 days ago by krithi119870
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