10
votes
11
answers
3.8k
views
17 follow
11
answers
readCufflinks problem with extdata
cummerbund written 6 months ago by biakemi30 • updated 3 months ago by markus.ball10
28
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7
answers
1.9k
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14 follow
7
answers
[FIXED] Error in Gviz (actually, rtracklayer) | IdeogramTrack
rtracklayer gviz written 11 months ago by Ramiro Magno80 • updated 6 months ago by aina.jene10
15
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0
answers
3.9k
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13 follow
0
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10
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3
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3.4k
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13 follow
3
answers
pre-ranked GSEA within R?
written 4.0 years ago by Daniel Schmolze50 • updated 17 months ago by assaron140
10
votes
16
answers
7.0k
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13 follow
16
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RDAVIDWebService Error 301: Moved Permanently
rdavidwebservice david written 2.5 years ago by Vivek.b40 • updated 2.0 years ago by Cristobal Fresno Rodríguez350
19
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2
answers
3.4k
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12 follow
2
answers
biomaRt no longer works with proxy after upgrade
biomart rcurl proxy written 2.2 years ago by enricoferrero560 • updated 2.2 years ago by hygine140
13
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3
answers
3.0k
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3
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New function lfcShrink() in DESeq2
deseq2 written 8 months ago by Michael Love15k
17
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4
answers
3.5k
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10 follow
4
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Removing continuous covariate effects in limma analysis
microarray limma written 2.8 years ago by Pauly Lin80 • updated 4 months ago by Gordon Smyth32k
9
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2
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2
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17
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6
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6.4k
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6
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Problem with biomart's listMarts function
biomart bug written 2.2 years ago by Johannes Rainer1.1k • updated 20 months ago by Paul Shannon360
14
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6
answers
1.6k
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10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 22 months ago by florian.noack60 • updated 11 weeks ago by Rory Stark2.2k
28
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4
answers
1.6k
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10 follow
4
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11
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2
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2.8k
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9 follow
2
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using duplicateCorrelation with limma+voom for RNA-seq data
limma voom written 3.7 years ago by John Blischak130 • updated 2.7 years ago by Gordon Smyth32k
5
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12
answers
6.2k
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9 follow
12
answers
WGCNA for RNA-Seq Sample Set, Outliers, and Spearman correlation
wgcna sample size outliers written 2.9 years ago by brohawndg50 • updated 2.4 years ago by mh.manoj0
11
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3
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3
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Nanostring analysis with limma
limma nanostring written 2.7 years ago by mali salmon320 • updated 2.7 years ago by ker610
24
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3
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9 follow
3
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5
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11
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2
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24
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3
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voom for spectral counts
proteomics limma massspectrometry voom spectral counts written 3.0 years ago by Ben Neely40 • updated 3.0 years ago by Gordon Smyth32k
11
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2
answers
808
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2
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9
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5
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1.4k
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8 follow
5
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arrayQualityMetrics does not complete successfully
arrayqualitymetrics written 23 months ago by Jan-Niklas10 • updated 14 months ago by fmunoz10
13
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2
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1.2k
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8 follow
2
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18
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2
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1.7k
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8 follow
2
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18
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2
answers
2.9k
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2
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Confidence intervals on edgeR logFC
edger statistics confidence interval written 3.3 years ago by ri.lars40 • updated 21 months ago by nwvidal0
6
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2
answers
3.4k
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8 follow
2
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remove microarray batch effects using Limma
microarray written 7.2 years ago by Xie, Zhi NIH/NHLBI [E]60 • updated 3 months ago by Gordon Smyth32k
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