11
votes
11
answers
4.5k
views
18 follow
11
answers
readCufflinks problem with extdata
cummerbund written 9 months ago by biakemi40 • updated 6 months ago by markus.ball10
28
votes
7
answers
2.1k
views
14 follow
7
answers
[FIXED] Error in Gviz (actually, rtracklayer) | IdeogramTrack
rtracklayer gviz written 14 months ago by Ramiro Magno90 • updated 9 months ago by aina.jene10
14
votes
3
answers
4.1k
views
12 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 11 months ago by Michael Love17k
14
votes
6
answers
1.9k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 2.1 years ago by florian.noack60 • updated 5 months ago by Rory Stark2.4k
15
votes
0
answers
3.7k
views
10 follow
0
answers
Tutorial: Bioconductor on Coursera
tutorial mooc written 2.6 years ago by Kasper Daniel Hansen6.3k • updated 26 days ago by ifmrdatascience0
17
votes
4
answers
3.9k
views
10 follow
4
answers
Removing continuous covariate effects in limma analysis
microarray limma written 3.1 years ago by Pauly Lin80 • updated 7 months ago by Gordon Smyth33k
5
votes
1
answer
1.2k
views
9 follow
1
answer
6
votes
2
answers
3.8k
views
8 follow
2
answers
remove microarray batch effects using Limma
microarray written 7.5 years ago by Xie, Zhi NIH/NHLBI [E]60 • updated 6 months ago by Gordon Smyth33k
19
votes
1
answer
790
views
7 follow
1
answer
News: markdown is coming to the support site
news markdown written 9 months ago by Lucas Schiffer210
4
votes
2
answers
206
views
7 follow
2
answers
Incredibly high/low foldChange
deseq2 written 7 weeks ago by jovel_juan10
17
votes
2
answers
1.6k
views
7 follow
2
answers
Limma camera function never gives any differentially expressed gene sets
limma written 2.8 years ago by chris86380 • updated 8 months ago by misterrandyclark0
0
votes
3
answers
1.2k
views
7 follow
3
answers
error in SRAdb
sradb written 3.7 years ago by Faryabi, Robert NIH/NCI [F]30 • updated 6 months ago by djlemas0
8
votes
0
answers
2.0k
views
6 follow
0
answers
9
votes
2
answers
1.9k
views
6 follow
2
answers
Differential expression analysis starting from TPM data
R tpm written 8 months ago by cahidora20 • updated 8 months ago by Gordon Smyth33k
8
votes
2
answers
380
views
6 follow
2
answers
4
votes
4
answers
3.2k
views
6 follow
4
answers
2
votes
5
answers
750
views
6 follow
5
answers
package or namespace load failed for TCGAbiolinks
tcgabiolinks written 7 months ago by jason.yijialin0 • updated 6 months ago by wenhuo hu200
8
votes
3
answers
230
views
6 follow
3
answers
2
votes
0
answers
256
views
5 follow
0
answers
3
votes
4
answers
7.6k
views
5 follow
4
answers
DESeq2 installation error
installation written 2.7 years ago by seeker0 • updated 6 months ago by Cheng-Yuan Kao80
10
votes
1
answer
1.8k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 2.9 years ago by Sean Davis21k • updated 6 months ago by Paul Harrison60
0
votes
3
answers
1.6k
views
5 follow
3
answers
3
votes
2
answers
229
views
5 follow
2
answers
5
votes
2
answers
434
views
5 follow
2
answers
biomaRt error in getBM for hsapiens_gene_ensembl
biomart written 4 months ago by rbacher10 • updated 4 months ago by romicakerketta0
6
votes
3
answers
336
views
5 follow
3
answers
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