10
votes
11
answers
3.1k
views
16 follow
11
answers
readCufflinks problem with extdata
cummerbund written 4 months ago by biakemi30 • updated 7 weeks ago by markus.ball10
28
votes
7
answers
1.8k
views
14 follow
7
answers
[FIXED] Error in Gviz (actually, rtracklayer) | IdeogramTrack
rtracklayer gviz written 9 months ago by Ramiro Magno80 • updated 4 months ago by aina.jene10
14
votes
6
answers
1.5k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 20 months ago by florian.noack60 • updated 16 days ago by Rory Stark2.1k
5
votes
1
answer
682
views
9 follow
1
answer
14
votes
4
answers
3.2k
views
9 follow
4
answers
Removing continuous covariate effects in limma analysis
microarray limma written 2.6 years ago by Pauly Lin60 • updated 9 weeks ago by Gordon Smyth32k
10
votes
3
answers
2.3k
views
8 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 6 months ago by Michael Love14k
6
votes
2
answers
3.2k
views
8 follow
2
answers
remove microarray batch effects using Limma
microarray written 7.1 years ago by Xie, Zhi NIH/NHLBI [E]60 • updated 4 weeks ago by Gordon Smyth32k
22
votes
3
answers
1.0k
views
8 follow
3
answers
0
votes
3
answers
1.0k
views
7 follow
3
answers
error in SRAdb
sradb written 3.3 years ago by Faryabi, Robert NIH/NCI [F]30 • updated 7 weeks ago by djlemas0
17
votes
2
answers
1.3k
views
7 follow
2
answers
Limma camera function never gives any differentially expressed gene sets
limma written 2.3 years ago by chris86320 • updated 3 months ago by misterrandyclark0
0
votes
5
answers
984
views
7 follow
5
answers
package 'ChAMP' demo/test code fails at champ.CNA()
software error written 2.8 years ago by Hamid Bolouri90 • updated 9 months ago by Yuan Tian70
8
votes
0
answers
1.8k
views
6 follow
0
answers
15
votes
1
answer
549
views
6 follow
1
answer
News: markdown is coming to the support site
news markdown written 3 months ago by Lucas Schiffer160
6
votes
2
answers
755
views
6 follow
2
answers
Plotting Differentially Methylated Regions
minfi bumphunter 450k region written 20 months ago by cardenasca40 • updated 11 months ago by Dimitris Polychronopoulos50
2
votes
5
answers
466
views
6 follow
5
answers
package or namespace load failed for TCGAbiolinks
tcgabiolinks written 9 weeks ago by jason.yijialin0 • updated 5 weeks ago by wenhuo hu200
8
votes
2
answers
183
views
6 follow
2
answers
4
votes
4
answers
2.6k
views
6 follow
4
answers
7
votes
3
answers
724
views
5 follow
3
answers
1
vote
5
answers
573
views
5 follow
5
answers
6
votes
3
answers
222
views
5 follow
3
answers
4
votes
3
answers
375
views
5 follow
3
answers
2
votes
1
answer
471
views
5 follow
1
answer
GOseq: count bias correction variations?
coverage goseq written 3.3 years ago by Christopher Conley40 • updated 7 months ago by Gordon Smyth32k
6
votes
2
answers
149
views
5 follow
2
answers
1
vote
1
answer
92
views
5 follow
1
answer
update TCGAbiolinks to version 3.6 and GDCquery doesn't work
software error tcgabiolinks written 11 days ago by sechenmo0 • updated 10 days ago by eshelden20
2
votes
2
answers
1.3k
views
5 follow
2
answers
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